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  5. Spa_g08001

Spa_g08001 (PAL4)


Aliases : PAL4

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201930 ATPAL2, PAL2,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00159210 PAL4,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00088930 ATPAL1, PAL1,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.03 OrthoFinder output from all 47 species
AT3G53260 ATPAL2, PAL2 phenylalanine ammonia-lyase 2 0.03 OrthoFinder output from all 47 species
Adi_g014959 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018721 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107906 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39212 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06672 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11634 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14595 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23707 ATPAL2, PAL2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20030.t1 PAL4, Aspi01Gene20030 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043679 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 0.03 OrthoFinder output from all 47 species
Cba_g22478 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G008000.1 PAL4, Ceric.28G008000 EC_4.3 carbon-nitrogen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G008100.1 PAL4, Ceric.28G008100 EC_4.3 carbon-nitrogen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g40579 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01768 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24302 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33771 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08593 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25215 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015123001 PAL4 Phenylalanine ammonia-lyase OS=Pinus taeda 0.03 OrthoFinder output from all 47 species
GSVIVT01015124001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 OrthoFinder output from all 47 species
GSVIVT01015138001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
GSVIVT01024292001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
GSVIVT01024295001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01025214001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
GSVIVT01025703001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 OrthoFinder output from all 47 species
Gb_21115 PAL4 phenylalanine ammonia lyase (PAL) 0.05 OrthoFinder output from all 47 species
Gb_25608 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Gb_31408 PAL4 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Gb_41796 PAL4 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41630.2 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41650.3 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41670.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.05 OrthoFinder output from all 47 species
LOC_Os02g41680.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43760.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43800.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Len_g38249 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50108 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_123220g0010 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.05 OrthoFinder output from all 47 species
MA_189052g0010 ATPAL1, PAL1 Phenylalanine ammonia-lyase OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Mp1g05190.1 ATPAL1, PAL1 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp1g10150.1 PAL4 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Mp4g14130.1 ATPAL2, PAL2 Phenylalanine ammonia-lyase class 1 (Fragment)... 0.02 OrthoFinder output from all 47 species
Mp4g14160.1 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp4g14170.1 PAL4 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Msp_g31510 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08420 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g10300 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25845 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35799 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11790 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26446 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18294 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_21810V3.1 PAL4, Pp3c10_21810 phenylalanine ammonia-lyase 4 0.02 OrthoFinder output from all 47 species
Pp3c21_7640V3.1 ATPAL2, PAL2, Pp3c21_7640 phenylalanine ammonia-lyase 2 0.02 OrthoFinder output from all 47 species
Pp3c24_13110V3.1 PAL4, Pp3c24_13110 phenylalanine ammonia-lyase 4 0.02 OrthoFinder output from all 47 species
Ppi_g08363 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30570 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023741 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-1545 0.03 OrthoFinder output from all 47 species
Solyc05g056170.3.1 ATPAL2, PAL2,... phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Solyc10g086180.2.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Zm00001e015155_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Zm00001e023033_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 77 550
No external refs found!