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  5. Spa_g07945

Spa_g07945 (WTF1, AtWTF1)


Aliases : WTF1, AtWTF1

Description : plastidial RNA basal splicing factor *(WTF1) & original description: none


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07945

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268210 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00014p00229190 emb1692,... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00133210 emb1692,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Adi_g040498 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033936 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g17771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22101 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Dac_g20695 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Dde_g30161 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027077001 WTF1, AtWTF1 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49610.1 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.04 OrthoFinder output from all 47 species
Len_g11779 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.07 OrthoFinder output from all 47 species
Nbi_g04260 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06540 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004928 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000591_P002 Zm00001e000591 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021099 PORR_domain 68 391
No external refs found!