Spa_g07815


Description : plastidial RNA processing factor *(PPR287) & original description: none


Gene families : OG0007004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007004_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07815

Target Alias Description ECC score Gene Family Method Actions
AT2G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g19823 No alias plastidial RNA processing factor *(PPR287) & original... 0.04 OrthoFinder output from all 47 species
Ala_g26348 No alias ndhA-specific mRNA splicing factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g09698 No alias ndhA-specific mRNA splicing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35119.t1 Aspi01Gene35119 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026506 No alias plastidial RNA processing factor *(PPR287) & original... 0.05 OrthoFinder output from all 47 species
Cba_g11391 No alias plastidial RNA processing factor *(PPR287) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g12037 No alias ndhA-specific mRNA splicing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13798 No alias ndhA-specific mRNA splicing factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012065001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.07 OrthoFinder output from all 47 species
Gb_35563 No alias ndhA-specific mRNA splicing factor 0.04 OrthoFinder output from all 47 species
LOC_Os02g07360.1 LOC_Os02g07360 ndhA-specific mRNA splicing factor. plastidial RNA... 0.03 OrthoFinder output from all 47 species
Lfl_g34115 No alias ndhA-specific mRNA splicing factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g28660.1 No alias ndhA-specific mRNA splicing factor. plastidial RNA... 0.02 OrthoFinder output from all 47 species
Ore_g05985 No alias ndhA-specific mRNA splicing factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20465 No alias plastidial RNA processing factor *(PPR287) & original... 0.03 OrthoFinder output from all 47 species
Smo109632 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 OrthoFinder output from all 47 species
Solyc02g068760.4.1 Solyc02g068760 ndhA-specific mRNA splicing factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 295 343
IPR002885 Pentatricopeptide_repeat 225 270
IPR002885 Pentatricopeptide_repeat 155 203
IPR002885 Pentatricopeptide_repeat 509 538
IPR033443 PPR_long 351 476
No external refs found!