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  5. Spa_g07779

Spa_g07779 (GR-RBP5)


Aliases : GR-RBP5

Description : not classified & original description: none


Gene families : OG0009633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07779
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Aop_g35904 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0009.g011832 CCR2, ATGRP7,... not classified & original description: CDS=1-1500 0.05 OrthoFinder output from all 47 species
Cba_g03786 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G017300.1 GRP2, ATGRP2,... not classified & original description: pacid=50591238... 0.04 OrthoFinder output from all 47 species
Ceric.30G025800.1 Ceric.30G025800 not classified & original description: pacid=50608606... 0.03 OrthoFinder output from all 47 species
Dde_g11118 GR-RBP5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22718 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03741 GR-RBP3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10717 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57695 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00859 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19079 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 28 98
No external refs found!