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  5. Spa_g07748

Spa_g07748 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07748

Target Alias Description ECC score Gene Family Method Actions
AT3G06380 TLP9, ATTLP9 tubby-like protein 9 0.03 OrthoFinder output from all 47 species
Ceric.1Z003500.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g19890 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_103920g0010 AtTLP3, TLP3 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Nbi_g07509 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 126 418
IPR001810 F-box_dom 65 110
No external refs found!