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  5. Spa_g07640

Spa_g07640 (LHW)


Aliases : LHW

Description : LHW/LHL-type transcription factor & original description: none


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07640
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Ala_g11500 CPUORF7 LHW/LHL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14103 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22410 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06748 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03201 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19341 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018463_P002 LHW, Zm00001e018463 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 3 174
No external refs found!