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  5. Spa_g07635

Spa_g07635 (SAR1, ATNUP160, NUP160)


Aliases : SAR1, ATNUP160, NUP160

Description : scaffold nucleoporin of nuclear pore complex *(NUP160) & original description: none


Gene families : OG0004742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07635

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00138020 SAR1, ATNUP160,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
AT1G33410 SAR1, ATNUP160, NUP160 SUPPRESSOR OF AUXIN RESISTANCE1 0.02 OrthoFinder output from all 47 species
Ala_g07840 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.02 OrthoFinder output from all 47 species
Aop_g07555 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.03 OrthoFinder output from all 47 species
Ceric.32G022400.1 SAR1, ATNUP160,... scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.04 OrthoFinder output from all 47 species
Cre07.g324000 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09396 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.04 OrthoFinder output from all 47 species
Dcu_g09122 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.04 OrthoFinder output from all 47 species
Dde_g26399 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015912001 SAR1, ATNUP160, NUP160 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Gb_36286 SAR1, ATNUP160, NUP160 NUP160 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Lfl_g11272 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.03 OrthoFinder output from all 47 species
MA_10430989g0010 SAR1, ATNUP160, NUP160 Nuclear pore complex protein NUP160 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436566g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g11350.1 SAR1, ATNUP160, NUP160 NUP160 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Ore_g16665 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.03 OrthoFinder output from all 47 species
Ppi_g16275 SAR1, ATNUP160, NUP160 scaffold nucleoporin of nuclear pore complex *(NUP160) &... 0.03 OrthoFinder output from all 47 species
Solyc01g102540.3.1 SAR1, ATNUP160,... NUP160 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Solyc01g102550.4.1 SAR1, ATNUP160,... Nuclear pore complex protein NUP160 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e013640_P002 SAR1, ATNUP160,... NUP160 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR035192 NUP160 529 714
No external refs found!