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  5. Spa_g07617

Spa_g07617


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07617
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00120840 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G54480 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
Aev_g39411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25833.t2 Aspi01Gene25833 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.04 OrthoFinder output from all 47 species
Azfi_s0304.g063813 No alias not classified & original description: CDS=88-2331 0.03 OrthoFinder output from all 47 species
Cba_g01214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.04 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.03 OrthoFinder output from all 47 species
Dac_g12389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004516001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04769 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g43770.1 LOC_Os02g43770 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g03363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432395g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g44146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758 No alias not classified & original description: CDS=148-2271 0.04 OrthoFinder output from all 47 species
Sam_g16580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021917_P001 Zm00001e021917 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023146_P001 Zm00001e023146 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 258 471
IPR006868 DUF630 1 59
No external refs found!