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  5. Spa_g07554

Spa_g07554 (AGL6)


Aliases : AGL6

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07554

Target Alias Description ECC score Gene Family Method Actions
AT4G24540 AGL24 AGAMOUS-like 24 0.03 OrthoFinder output from all 47 species
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g033073 AGL16 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01002442001 AGL24 RNA biosynthesis.transcriptional activation.MADS box... 0.05 OrthoFinder output from all 47 species
GSVIVT01012250001 AGL7, AP1 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
MA_18048g0010 AGL21 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
MA_19387g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
MA_25342g0010 AGL16 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_75656g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_770623g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_78010g0010 SHP2, AGL5 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Ppi_g60352 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62341 ANR1, AGL44 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g071730.4.1 SHP2, AGL5,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Spa_g51497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003667_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e006950_P001 AGL32, TT16,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e013738_P001 AGL32, TT16,... transcription factor (MADS/AGL) 0.01 OrthoFinder output from all 47 species
Zm00001e027034_P001 PI, Zm00001e027034 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e030373_P001 AGL10, CAL1,... transcription factor (MADS/AGL) 0.01 OrthoFinder output from all 47 species
Zm00001e031267_P003 SHP2, AGL5,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e039774_P001 SHP2, AGL5,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 161 246
IPR002100 TF_MADSbox 86 133
No external refs found!