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  5. Spa_g07317

Spa_g07317 (ELF9)


Aliases : ELF9

Description : not classified & original description: none


Gene families : OG0005010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07317

Target Alias Description ECC score Gene Family Method Actions
Adi_g111742 ELF9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06502 ELF9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g08415 ELF9 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20936 ELF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g06850.1 ELF9 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g37956 ELF9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017934 ELF9 not classified & original description: CDS=204-1784 0.03 OrthoFinder output from all 47 species
Solyc11g008700.2.1 ELF9, Solyc11g008700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g34474 ELF9 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 435 484
IPR000504 RRM_dom 277 348
IPR025640 GYF_2 17 67
No external refs found!