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  5. AMTR_s00005p00062400

AMTR_s00005p00062400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.9

Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.PRDA1 FSD2-interacting factor


Gene families : OG_01_0003938 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003938_tree ,
OG_02_0004555 (LandPlants) Phylogenetic Tree(s): OG_02_0004555_tree ,
OG_03_0004380 (SeedPlants) Phylogenetic Tree(s): OG_03_0004380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00062400
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G48470 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
LOC_Os11g23790.1 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.02 Archaeplastida
MA_225523g0010 No alias Protein PEP-RELATED DEVELOPMENT ARRESTED 1,... 0.02 Archaeplastida
Mp4g06930.1 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.02 Archaeplastida
Pp3c19_21450V3.1 No alias No annotation 0.05 Archaeplastida
Zm00001e021412_P001 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.04 Archaeplastida
AT5G48470 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 LandPlants
GSVIVT01006226001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 LandPlants
Mp4g06930.1 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.02 LandPlants
Pp3c19_21450V3.1 No alias No annotation 0.05 LandPlants
Solyc09g056160.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e021412_P001 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.04 LandPlants
AT5G48470 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 SeedPlants
GSVIVT01006226001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 SeedPlants
Solyc09g056160.4.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e021412_P001 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!