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  5. Spa_g07241

Spa_g07241


Description : not classified & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00070150 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g41920.1 LOC_Os07g41920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g57085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g073850.1.1 Solyc01g073850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 111 157
IPR004146 DC1 56 101
IPR004146 DC1 3 46
IPR004146 DC1 167 214
IPR001841 Znf_RING 301 343
No external refs found!