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  5. Spa_g07107

Spa_g07107 (OSU1, QUA2, TSD2)


Aliases : OSU1, QUA2, TSD2

Description : pectin methyltransferase *(QUA2) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0002602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07107
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Aev_g06693 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Als_g07467 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Aop_g29423 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Cba_g12714 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Dac_g21143 QUL1 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Ehy_g06931 OSU1, QUA2, TSD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21116 OSU1, QUA2, TSD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012188001 QUL2 Probable methyltransferase PMT5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_33593 OSU1, QUA2, TSD2 Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51860.1 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ppi_g52487 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Sam_g25099 No alias pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Sam_g38902 No alias pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Smo426562 OSU1, QUA2, TSD2 Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g35017 OSU1, QUA2, TSD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14269 OSU1, QUA2, TSD2 pecTin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Zm00001e023857_P001 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 188 700
No external refs found!