1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g07061

Spa_g07061


Description : not classified & original description: none


Gene families : OG0012786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012786_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07061
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Als_g03833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11095 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.36G060100.1 Ceric.36G060100 not classified & original description: pacid=50568536... 0.04 OrthoFinder output from all 47 species
Dde_g24207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07554 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01331 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 469 516
IPR002885 Pentatricopeptide_repeat 368 416
IPR002885 Pentatricopeptide_repeat 268 314
IPR002885 Pentatricopeptide_repeat 672 719
IPR002885 Pentatricopeptide_repeat 747 769
IPR002885 Pentatricopeptide_repeat 169 194
IPR002885 Pentatricopeptide_repeat 545 571
IPR002885 Pentatricopeptide_repeat 573 603
IPR002885 Pentatricopeptide_repeat 140 159
No external refs found!