1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g06898

Spa_g06898 (EMB976)


Aliases : EMB976

Description : plastidial splicing factor *(PDM4) & original description: none


Gene families : OG0007469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06898

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene25909.t1 EMB976, Aspi01Gene25909 plastidial splicing factor *(PDM4) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024406 EMB976 plastidial splicing factor *(PDM4) & original... 0.04 OrthoFinder output from all 47 species
Ceric.11G008200.1 EMB976, Ceric.11G008200 plastidial splicing factor *(PDM4) & original... 0.02 OrthoFinder output from all 47 species
MA_10434955g0010 EMB976 Pentatricopeptide repeat-containing protein At5g27270... 0.03 OrthoFinder output from all 47 species
Ppi_g44117 EMB976 plastidial splicing factor *(PDM4) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 347 405
IPR002885 Pentatricopeptide_repeat 292 320
IPR002885 Pentatricopeptide_repeat 442 461
IPR002885 Pentatricopeptide_repeat 537 564
IPR002885 Pentatricopeptide_repeat 188 216
IPR002885 Pentatricopeptide_repeat 225 251
No external refs found!