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  5. Spa_g06831

Spa_g06831 (ATHM2)


Aliases : ATHM2

Description : thioredoxin *(TRX-M) & original description: none


Gene families : OG0001012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06831
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.05 OrthoFinder output from all 47 species
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.04 OrthoFinder output from all 47 species
Adi_g086491 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107265 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12040 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48830 ATHM2 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04875 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08794 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39548 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11048 ATHM2 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23725 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G062900.1 ATHM2, Ceric.09G062900 thioredoxin *(TRX-M) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.23G041700.1 ATHM2, Ceric.23G041700 thioredoxin *(TRX-M) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G036000.1 ATHM1, THM1,... thioredoxin *(TRX-M) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g01349 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21277 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02608 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g23261 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01752 ATHM1, THM1, TRX-M1, ATM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03185 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010012001 ATHM4, TRX-M4, ATM4 Redox homeostasis.chloroplast redox homeostasis.M-type... 0.06 OrthoFinder output from all 47 species
Gb_31181 ATHM2 M-type thioredoxin 0.02 OrthoFinder output from all 47 species
LOC_Os12g08730.1 ATHM2, LOC_Os12g08730 M-type thioredoxin 0.03 OrthoFinder output from all 47 species
Len_g07374 ATHM2 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09823 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16078 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21827 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19591 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
MA_474303g0010 ATHM2 M-type thioredoxin 0.03 OrthoFinder output from all 47 species
Mp4g18950.1 ATHM1, THM1, TRX-M1, ATM1 M-type thioredoxin 0.02 OrthoFinder output from all 47 species
Msp_g12620 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10092 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10112 ATHM2 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13311 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c25_2880V3.1 ATHM1, THM1,... thioredoxin M-type 1 0.02 OrthoFinder output from all 47 species
Ppi_g02691 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22064 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07636 No alias thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07637 No alias thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24018 No alias thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063190.3.1 ATHM4, TRX-M4,... M-type thioredoxin 0.03 OrthoFinder output from all 47 species
Solyc10g006970.3.1 ATHM4, TRX-M4,... M-type thioredoxin 0.04 OrthoFinder output from all 47 species
Tin_g00552 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018385_P001 ATHM4, TRX-M4,... M-type thioredoxin 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 82 179
No external refs found!