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  5. AMTR_s00096p00054100

AMTR_s00096p00054100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00096.22

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0002078 (LandPlants) Phylogenetic Tree(s): OG_02_0002078_tree ,
OG_03_0001123 (SeedPlants) Phylogenetic Tree(s): OG_03_0001123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00054100
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g11600.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.02 LandPlants
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.03 LandPlants
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.02 LandPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 6 163
No external refs found!