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  5. Spa_g06696

Spa_g06696 (SCRM2, ICE2)


Aliases : SCRM2, ICE2

Description : transcription factor *(ICE1/2) & original description: none


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06696
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00170610 ATICE1, ICE1,... External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g04435 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g17032 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05040 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14438 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03868.t2 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66445.t1 ATICE1, ICE1,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.07 OrthoFinder output from all 47 species
Cba_g14843 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75218 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G023800.1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.23G086600.1 SCRM2, ICE2,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g17361 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004405001 bHLH093 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01008637001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.03 OrthoFinder output from all 47 species
Len_g04800 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.05 OrthoFinder output from all 47 species
MA_20585g0010 SCRM2, ICE2 transcription factor (bHLH). transcription factor (ICE1|2) 0.01 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.05 OrthoFinder output from all 47 species
MA_959991g0010 ATICE1, ICE1, SCRM transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001696 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-2049 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002409 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-732 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026391 SCRM2, ICE2 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc02g063430.4.1 bHLH093, Solyc02g063430 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Tin_g08227 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44648 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 449 491
No external refs found!