Spa_g06606


Description : not classified & original description: none


Gene families : OG0002016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002016_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06606

Target Alias Description ECC score Gene Family Method Actions
Adi_g109709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26106.t1 Aspi01Gene26106 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G037000.1 Ceric.38G037000 not classified & original description: pacid=50579751... 0.03 OrthoFinder output from all 47 species
Ehy_g03747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435174g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g08658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013261 No alias not classified & original description: CDS=1-1635 0.02 OrthoFinder output from all 47 species
Zm00001e039207_P005 Zm00001e039207 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 373 442
IPR000504 RRM_dom 198 268
IPR000504 RRM_dom 278 339
No external refs found!