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  5. Spa_g06577

Spa_g06577


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06577

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00077180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Adi_g003400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g006731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g071576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59172.t1 Aspi01Gene59172 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z051200.1 Ceric.1Z051200 not classified & original description: pacid=50617037... 0.02 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.03 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.05 OrthoFinder output from all 47 species
LOC_Os01g07140.1 LOC_Os01g07140 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 121.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.05 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.03 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g094130.3.1 Solyc02g094130 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 268.0) 0.03 OrthoFinder output from all 47 species
Spa_g47097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.02 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 60 182
No external refs found!