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  5. Spa_g06286

Spa_g06286


Description : not classified & original description: none


Gene families : OG0013231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06286
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aop_g69073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 571 617
IPR002885 Pentatricopeptide_repeat 371 419
IPR002885 Pentatricopeptide_repeat 545 569
IPR002885 Pentatricopeptide_repeat 446 471
IPR002885 Pentatricopeptide_repeat 345 366
IPR002885 Pentatricopeptide_repeat 646 668
IPR002885 Pentatricopeptide_repeat 674 691
IPR002885 Pentatricopeptide_repeat 273 298
No external refs found!