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  5. Spa_g06274

Spa_g06274


Description : not classified & original description: none


Gene families : OG0002319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06274
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g010980 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g517100 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g45122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g49503 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014069001 No alias Fatty-acid-binding protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01032685001 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os11g02440.1 LOC_Os11g02440 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g30891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g38923 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015103 No alias chalcone isomerase & original description: CDS=253-1011 0.02 OrthoFinder output from all 47 species
Sam_g08582 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 74 272
No external refs found!