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  5. Spa_g06250

Spa_g06250


Description : not classified & original description: none


Gene families : OG0006138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06250

Target Alias Description ECC score Gene Family Method Actions
Adi_g089329 ATPRP40C, PRP40C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0385.g067519 No alias not classified & original description: CDS=7-1794 0.03 OrthoFinder output from all 47 species
Ceric.37G045200.1 Ceric.37G045200 not classified & original description: pacid=50615747... 0.03 OrthoFinder output from all 47 species
Dcu_g07012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07915 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR001202 WW_dom 344 371
IPR000504 RRM_dom 448 517
No external refs found!