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  5. Spa_g06201

Spa_g06201 (ATCPL3, CPL3)


Aliases : ATCPL3, CPL3

Description : subcluster H/CPL3-4 phosphatase & original description: none


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00153170 ATCPL3, CPL3,... Protein modification.dephosphorylation.aspartate-based... 0.03 OrthoFinder output from all 47 species
Aob_g31997 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G014800.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_15284 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.04 OrthoFinder output from all 47 species
LOC_Os05g32430.1 CPL4, LOC_Os05g32430 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
Sam_g28256 No alias subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005460.4.1 CPL4, Solyc07g005460 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
Solyc12g063050.3.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 1152 1314
No external refs found!