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  5. AMTR_s00096p00039880

AMTR_s00096p00039880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00096.17

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor


Gene families : OG_01_0003625 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003625_tree ,
OG_02_0004632 (LandPlants) Phylogenetic Tree(s): OG_02_0004632_tree ,
OG_03_0005444 (SeedPlants) Phylogenetic Tree(s): OG_03_0005444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00039880
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.12 Archaeplastida
Cpa|evm.model.tig00020604.12 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Cre08.g370601 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
GSVIVT01007723001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
LOC_Os11g04200.1 No alias SSU processome assembly factor (MPP10) 0.03 Archaeplastida
MA_77639g0010 No alias SSU processome assembly factor (MPP10) 0.04 Archaeplastida
Mp8g00320.1 No alias SSU processome assembly factor (MPP10) 0.08 Archaeplastida
Pp3c4_31210V3.1 No alias No annotation 0.05 Archaeplastida
Smo423082 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Solyc03g112820.4.1 No alias SSU processome assembly factor (MPP10) 0.09 Archaeplastida
Zm00001e032203_P002 No alias SSU processome assembly factor (MPP10) 0.11 Archaeplastida
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.12 LandPlants
GSVIVT01007723001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 LandPlants
LOC_Os11g04200.1 No alias SSU processome assembly factor (MPP10) 0.03 LandPlants
MA_77639g0010 No alias SSU processome assembly factor (MPP10) 0.04 LandPlants
Mp8g00320.1 No alias SSU processome assembly factor (MPP10) 0.06 LandPlants
Pp3c4_31210V3.1 No alias No annotation 0.04 LandPlants
Smo423082 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 LandPlants
Solyc03g112820.4.1 No alias SSU processome assembly factor (MPP10) 0.08 LandPlants
Zm00001e032203_P002 No alias SSU processome assembly factor (MPP10) 0.1 LandPlants
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.12 SeedPlants
GSVIVT01007723001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 SeedPlants
LOC_Os11g04200.1 No alias SSU processome assembly factor (MPP10) 0.03 SeedPlants
LOC_Os12g04010.1 No alias SSU processome assembly factor (MPP10) 0.01 SeedPlants
Solyc03g112820.4.1 No alias SSU processome assembly factor (MPP10) 0.08 SeedPlants
Zm00001e032203_P002 No alias SSU processome assembly factor (MPP10) 0.1 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!