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  5. Spa_g06135

Spa_g06135 (MED34, ATRECQ2, RECQL2)


Aliases : MED34, ATRECQ2, RECQL2

Description : not classified & original description: none


Gene families : OG0007173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007173_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06135

Target Alias Description ECC score Gene Family Method Actions
Aop_g69305 ATRECQ4A, ATSGS1, RECQ4A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g490150 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g07467 ATRECQ4A, ATSGS1, RECQ4A not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g48360.1 MED34, ATRECQ2,... Mediator of RNA polymerase II transcription subunit 34... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR018982 RQC_domain 403 500
IPR029491 Helicase_HTH 661 757
IPR032284 RecQ_Zn-bd 336 397
IPR011545 DEAD/DEAH_box_helicase_dom 16 175
IPR002121 HRDC_dom 552 618
IPR001650 Helicase_C 222 322
No external refs found!