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  5. Spa_g06091

Spa_g06091 (GT-1)


Aliases : GT-1

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0003320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06091
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00209070 GT-1,... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Cre03.g151550 No alias No description available 0.02 OrthoFinder output from all 47 species
Pnu_g06278 GT-1 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017582 GT-1 Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 64 146
No external refs found!