1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g05724

Spa_g05724 (SDG23, SUVH6)


Aliases : SDG23, SUVH6

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05724
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AT2G33290 ATSUVH2, SDG3, SUVH2 SU(VAR)3-9 homolog 2 0.02 OrthoFinder output from all 47 species
Aev_g06142 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g32362 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aob_g05317 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aop_g06509 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g13753 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g05945 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g38983 SET22, SDG22, SUVH9 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ceric.13G009600.1 SUVH3, SDG19,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.14G011700.1 SDG23, SUVH6,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.19G021100.1 SDG23, SUVH6,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.32G043200.1 SUVH1, Ceric.32G043200 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g25398 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ehy_g14200 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Gb_41440 SUVH5, SGD9 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
LOC_Os11g03700.1 SUVH1, LOC_Os11g03700 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Len_g01432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_95753g0010 SDG23, SUVH6 class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Ore_g17339 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g03278 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ppi_g04684 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g21436 SUVH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g077070.2.1 SUVH3, SDG19,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Spa_g11936 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 1092 1188
IPR001214 SET_dom 1207 1337
IPR003105 SRA_YDG 912 1066
No external refs found!