Spa_g05669

Description : not classified & original description: none

Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g05669

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00193590	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT4G24430	No alias	Rhamnogalacturonate lyase family protein	0.1	OrthoFinder output from all 47 species
Dcu_g18808	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g07865	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0019566	arabinose metabolic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046373	L-arabinose metabolic process	IEP	HCCA
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029413	RG-lyase_II	366	438
IPR010325	Rhamnogal_lyase	26	213
IPR029411	RG-lyase_III	452	640

External Links

No external refs found!