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  5. Spa_g05431

Spa_g05431


Description : E3 ubiquitin ligase *(RNF170) & original description: none


Gene families : OG0005323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05431

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene56747.t1 Aspi01Gene56747 E3 ubiquitin ligase *(RNF170) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043105 No alias E3 ubiquitin ligase *(RNF170) & original description: CDS=202-996 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021281.16 No alias No description available 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 85 127
IPR010652 DUF1232 205 238
No external refs found!