Spa_g05379


Description : not classified & original description: none


Gene families : OG0006936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006936_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05379
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Dac_g07745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!