Spa_g05142 (ATARFA1B, ARFA1B)

Aliases : ATARFA1B, ARFA1B

Description : ARF-GTPase *(ARF1) & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g05142

Target	Alias	Description	ECC score	Gene Family Method
Adi_g003699	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g009714	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g048023	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g051592	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g12102	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07699	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12686	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07482	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g19389	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g68389	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.21	ATARFA1F, ARFA1F	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
Dac_g05473	ATARFA1F, ARFA1F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g09806	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g30050	No alias	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013765001	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
LOC_Os02g47110.2	ATARFB1B,...	ARF-GTPase	0.01	OrthoFinder output from all 47 species
LOC_Os05g41060.1	ATARFA1F,...	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Lfl_g31478	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_4349g0020	ATARFA1F, ARFA1F	ARF-GTPase	0.04	OrthoFinder output from all 47 species
Mp2g11170.1	ATARFA1B, ARFA1B	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Mp4g04230.1	ATARFA1F, ARFA1F	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Nbi_g15523	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g15667	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g02984	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28789	ATARFA1F, ARFA1F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c12_14910V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020267	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: CDS=156-554	0.03	OrthoFinder output from all 47 species
Solyc01g008000.3.1	ATARFA1B,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Tin_g05371	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019488_P002	ARFA1E,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e033127_P003	ARF1A1C, Zm00001e033127	ARF-GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	176

External Links

No external refs found!

Spa_g05142 (ATARFA1B, ARFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation