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  5. Spa_g05137

Spa_g05137


Description : component *(PRL1/MAC2) of MAC spliceosome-associated complex & original description: none


Gene families : OG0005707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05137
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0100.g044340 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Ceric.03G030600.1 Ceric.03G030600 component *(PRL1/MAC2) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Ppi_g02082 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006776 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 428 457
IPR001680 WD40_repeat 161 198
IPR001680 WD40_repeat 245 282
IPR001680 WD40_repeat 288 324
IPR001680 WD40_repeat 202 240
No external refs found!