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  5. Spa_g05050

Spa_g05050


Description : membrane trafficking factor *(GFS9) & original description: none


Gene families : OG0003462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05050

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252640 evm_27.TU.AmTr_v1... Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g080815 No alias membrane trafficking factor *(GFS9) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021352.50 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp3g05320.1 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e040667_P003 Zm00001e040667 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR019155 CLEC16A/TT9_N 41 191
IPR045820 CLEC16A/TT9_C 243 336
No external refs found!