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  5. Spa_g05023

Spa_g05023


Description : component *(LHCq) of LHC-II complex & original description: none


Gene families : OG0006405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05023

Target Alias Description ECC score Gene Family Method Actions
AT1G76570 No alias Chlorophyll A-B binding family protein 0.06 OrthoFinder output from all 47 species
Aob_g20424 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G013700.1 Ceric.10G013700 component *(LHCq) of LHC-II complex & original... 0.06 OrthoFinder output from all 47 species
Cre02.g110750 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g14212 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os09g12540.1 LOC_Os09g12540 component LHCq of LHC-II complex 0.04 OrthoFinder output from all 47 species
Mp8g12010.1 No alias component LHCq of LHC-II complex 0.03 OrthoFinder output from all 47 species
Nbi_g09744 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02997 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00398 No alias component *(LHCq) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02034 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033739_P001 Zm00001e033739 component LHCq of LHC-II complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 129 304
No external refs found!