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  5. Spa_g04985

Spa_g04985


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04985

Target Alias Description ECC score Gene Family Method Actions
AT2G44730 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.02 OrthoFinder output from all 47 species
AT3G24860 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g069214 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096869 FIP2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01427 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00745 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09247 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04504.t1 Aspi01Gene04504 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001295 No alias Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g07494 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34228 No alias Trihelix-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g03225 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16065 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04671 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00734 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30006 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09323 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00971 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06293 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05813 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02489 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05514 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 24 114
No external refs found!