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  5. Spa_g04981

Spa_g04981


Description : mTERF-type transcription factor & original description: none


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04981
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00246250 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s02857p00005060 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AT5G07900 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
Als_g18494 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22741 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06519 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02967 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06040 EMB2219 mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07610 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
LOC_Os05g33440.1 LOC_Os05g33440 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12070.1 LOC_Os06g12070 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Len_g24851 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Nbi_g10336 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17587 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20233 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10113 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29276 No alias mTERF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g13366 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18975 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24410 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo403419 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Solyc02g067960.3.1 Solyc02g067960 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Solyc04g051880.3.1 Solyc04g051880 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072540.3.1 Solyc04g072540 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Tin_g21097 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24963 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 86 219
IPR003690 MTERF 240 347
No external refs found!