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  5. Spa_g04878

Spa_g04878


Description : GASA precursor polypeptide & original description: none


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04878

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00230770 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
AT5G15230 GASA4 GAST1 protein homolog 4 0.07 OrthoFinder output from all 47 species
Aev_g36519 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43057 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34519 GASA1 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05518 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z105500.1 Ceric.1Z105500 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g12277 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27816 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28012 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007817001 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
GSVIVT01008003001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
GSVIVT01020178001 No alias Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
GSVIVT01034476001 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
LOC_Os06g15620.1 LOC_Os06g15620 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_24001g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_7575249g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Ore_g24203 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54427 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09846 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107370.3.1 Solyc01g107370 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc02g089350.3.1 Solyc02g089350 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Solyc03g113910.3.1 Solyc03g113910 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc06g069790.4.1 Solyc06g069790 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Tin_g12034 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13744 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 51 110
No external refs found!