Spa_g04858


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04858

Target Alias Description ECC score Gene Family Method Actions
Adi_g001198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08216 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19628.t1 Aspi01Gene19628 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25983.t1 Aspi01Gene25983 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010269 No alias not classified & original description: CDS=1215-6422 0.02 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.03 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Msp_g13348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g065340.3.1 Solyc09g065340 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 698 749
IPR008395 Agenet-like_dom 18 102
No external refs found!