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  5. Spa_g04856

Spa_g04856


Description : not classified & original description: none


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04856

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00122770 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G01440 No alias Protein of unknown function (DUF3133) 0.03 OrthoFinder output from all 47 species
AT4G01090 No alias Protein of unknown function (DUF3133) 0.04 OrthoFinder output from all 47 species
Adi_g046800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g40153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30136.t1 Aspi01Gene30136 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0142.g051417 No alias not classified & original description: CDS=41-2752 0.04 OrthoFinder output from all 47 species
Ceric.06G026900.1 Ceric.06G026900 not classified & original description: pacid=50619276... 0.03 OrthoFinder output from all 47 species
Dac_g12907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027058001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g14781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009119 No alias not classified & original description: CDS=313-2328 0.05 OrthoFinder output from all 47 species
Tin_g13366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021480 Zinc_ribbon_12 1145 1185
No external refs found!