Spa_g04802 (RPT3)

Aliases : RPT3

Description : regulatory component *(RPT3) of 26S proteasome & original description: none

Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g04802

Target	Alias	Description	ECC score	Gene Family Method
Ceric.01G028300.1	RPT3, Ceric.01G028300	regulatory component *(RPT3) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00022075.46	RPT3	26S proteasome regulatory subunit 6B homolog...	0.01	OrthoFinder output from all 47 species
Cre09.g402450	RPT3	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
Dac_g16904	RPT3	regulatory component *(RPT3) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Mp8g10830.1	RPT3	regulatory component RPT3 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Pnu_g12682	RPT3	regulatory component *(RPT3) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Solyc06g082630.4.1	RPT3, Solyc06g082630	regulatory component RPT3 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Solyc06g082660.4.1	RPT3, Solyc06g082660	regulatory component RPT3 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Zm00001e022619_P001	RPT3, Zm00001e022619	regulatory component RPT3 of 26S proteasome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	194	327
IPR041569	AAA_lid_3	350	392
IPR032501	Prot_ATP_ID_OB_C	81	136

External Links

No external refs found!