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  5. Spa_g04785

Spa_g04785 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : programmed cell death metacaSpase-like regulator *(MCP1) & original description: none


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04785
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aop_g11959 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
Ceric.29G073300.1 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
GSVIVT01013841001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.02 OrthoFinder output from all 47 species
Gb_27565 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
LOC_Os03g27190.1 AtMC2, MC2,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
MA_117189g0010 ATMC1, LOL3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g52113 No alias programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Zm00001e037977_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 16 40
No external refs found!