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  5. Spa_g04774

Spa_g04774


Description : not classified & original description: none


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04774

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g08825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g19107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22752.t1 Aspi01Gene22752 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.03 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01009215001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19716 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g36473 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434775g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g13570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g13580.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g03160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g20220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g11130.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08194 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g07865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 357 424
IPR010325 Rhamnogal_lyase 5 202
IPR029411 RG-lyase_III 441 629
No external refs found!