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  4. Sequence
  5. Spa_g04772

Spa_g04772


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04772

Target Alias Description ECC score Gene Family Method Actions
Adi_g003400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g006804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g17929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_74199g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 236.0) 0.02 OrthoFinder output from all 47 species
Msp_g35713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03608 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11201 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g27379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo91200 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.02 OrthoFinder output from all 47 species
Solyc08g008370.3.1 Solyc08g008370 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 291.0) 0.02 OrthoFinder output from all 47 species
Solyc09g074380.4.1 Solyc09g074380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g02148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031088_P005 Zm00001e031088 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 117 242
No external refs found!