Spa_g04723


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04723

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02331.t1 Aspi01Gene02331 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14090.t1 Aspi01Gene14090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24054.t1 OTP82, Aspi01Gene24054 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70275.t1 Aspi01Gene70275 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009910 EMB2758 not classified & original description: CDS=1-1803 0.05 OrthoFinder output from all 47 species
Azfi_s0052.g031587 No alias not classified & original description: CDS=171-3077 0.03 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.04 OrthoFinder output from all 47 species
Cba_g01506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G067800.1 Ceric.07G067800 not classified & original description: pacid=50627089... 0.03 OrthoFinder output from all 47 species
Ceric.17G074800.1 Ceric.17G074800 not classified & original description: pacid=50618293... 0.04 OrthoFinder output from all 47 species
Ceric.17G076500.1 Ceric.17G076500 not classified & original description: pacid=50617139... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.04 OrthoFinder output from all 47 species
Ceric.20G001900.1 Ceric.20G001900 not classified & original description: pacid=50565969... 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.02 OrthoFinder output from all 47 species
Dac_g09153 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g74600.1 CRR22, LOC_Os01g74600 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g18801 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44150 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26145 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03200 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28899 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40050 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43234 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003168 CRR22 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019430 No alias not classified & original description: CDS=1-4416 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023714 No alias not classified & original description: CDS=1-2772 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026929 No alias not classified & original description: CDS=1-2745 0.02 OrthoFinder output from all 47 species
Sam_g18488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39845 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.06 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 399 446
IPR002885 Pentatricopeptide_repeat 298 346
IPR002885 Pentatricopeptide_repeat 198 237
IPR002885 Pentatricopeptide_repeat 163 195
IPR002885 Pentatricopeptide_repeat 475 498
IPR002885 Pentatricopeptide_repeat 100 126
IPR002885 Pentatricopeptide_repeat 504 533
IPR002885 Pentatricopeptide_repeat 578 599
IPR002885 Pentatricopeptide_repeat 273 296
IPR002885 Pentatricopeptide_repeat 538 564
No external refs found!