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  5. Spa_g04497

Spa_g04497


Description : not classified & original description: none


Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04497

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00227230 evm_27.TU.AmTr_v1... Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G36320 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Adi_g079128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07842 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.07 OrthoFinder output from all 47 species
Aspi01Gene30042.t1 Aspi01Gene30042 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0060.g034818 No alias not classified & original description: CDS=53-1405 0.04 OrthoFinder output from all 47 species
Ceric.23G023200.1 Ceric.23G023200 not classified & original description: pacid=50611197... 0.04 OrthoFinder output from all 47 species
GSVIVT01006768001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01008964001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g20110.1 LOC_Os01g20110 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g18242 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_77650g0010 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008297 No alias not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017048 No alias not classified & original description: CDS=50-1423 0.02 OrthoFinder output from all 47 species
Sam_g25138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo77953 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g072400.4.1 Solyc04g072400 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e024745_P001 Zm00001e024745 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e029280_P001 Zm00001e029280 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!