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  5. Spa_g04349

Spa_g04349


Description : regulatory protein *(CMU) of microtubule-dependent CSC insertion & original description: none


Gene families : OG0000703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04349

Target Alias Description ECC score Gene Family Method Actions
AT1G27500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03403 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Aev_g04844 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Aev_g24667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37891 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ala_g14285 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.06 OrthoFinder output from all 47 species
Ala_g23645 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aob_g18415 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aob_g23493 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Aop_g05769 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Aop_g14298 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10392.t1 Aspi01Gene10392 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031359 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Azfi_s0292.g063422 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ceric.10G066700.1 Ceric.10G066700 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ceric.17G006700.1 Ceric.17G006700 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Dac_g05126 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Dac_g17797 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Dcu_g01862 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ehy_g13445 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
GSVIVT01027175001 No alias Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032474001 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03607 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
Gb_24147 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
LOC_Os02g01960.1 LOC_Os02g01960 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.05 OrthoFinder output from all 47 species
LOC_Os02g47880.1 LOC_Os02g47880 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.05 OrthoFinder output from all 47 species
Len_g12314 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Len_g20870 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Len_g58502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04984 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Lfl_g27290 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
MA_10430767g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_23850g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
MA_4756871g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_50635g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_760658g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
Mp6g16080.1 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
Msp_g15522 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Nbi_g01231 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Nbi_g03753 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Pir_g13620 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Pnu_g15330 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010341 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015505 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Sam_g19440 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Sam_g19488 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Solyc03g114320.4.1 Solyc03g114320 Protein KINESIN LIGHT CHAIN-RELATED 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g008460.2.1 Solyc08g008460 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
Tin_g02078 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Tin_g11107 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Tin_g11108 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Tin_g28507 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Zm00001e013426_P003 Zm00001e013426 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
Zm00001e023340_P002 Zm00001e023340 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.06 OrthoFinder output from all 47 species
Zm00001e025391_P001 Zm00001e025391 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 229 254
No external refs found!