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Aliases : AT PRP39-2, PRP39-2
Description : not classified & original description: none
Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g03914 | |
| Cluster | HCCA: Cluster_144 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00179p00033790 | AT PRP39-2,... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g018948 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g019406 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12647 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g37742 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25483 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G096600.1 | PRP39, Ceric.04G096600 | pre-mRNA-processing protein *(PRP39) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre16.g670300 | PRP39 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g40489 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15145 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g11777 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028423001 | PRP39 | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23802 | PRP39 | pre-mRNA-processing protein (PRP39) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g11200.1 | PRP39, LOC_Os03g11200 | pre-mRNA-processing protein (PRP39) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g23571 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g19659 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Mp6g00560.1 | PRP39 | pre-mRNA-processing protein (PRP39) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38712 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g12740 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06717 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g21848 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g29159 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005318 | PRP39 | pre-mRNA-processing protein *(PRP39) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11835 | No alias | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g19871 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |