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  5. Spa_g03613

Spa_g03613


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03613
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT5G01380 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g09969 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g15411 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10269 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10408 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15267 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21090 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02477 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05288.t1 CRK8, Aspi01Gene05288 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13829.t1 Aspi01Gene13829 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009895 No alias Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015350 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G046600.1 Ceric.35G046600 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02297 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19503 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19765 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Gb_20046 No alias transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species
Gb_22614 No alias transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species
LOC_Os05g03740.1 LOC_Os05g03740 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Len_g19288 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436704g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g31197 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.08 OrthoFinder output from all 47 species
Nbi_g42102 No alias Trihelix-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g11122 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30407 No alias Trihelix-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g45245 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g06424 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06425 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31822 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06854 No alias Trihelix-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006017 No alias Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Solyc09g005560.4.1 Solyc09g005560 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Spa_g51759 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04561 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 79 159
No external refs found!