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  5. Spa_g03490

Spa_g03490 (ABI8, ELD1, KOB1)


Aliases : ABI8, ELD1, KOB1

Description : regulatory protein *(KOBITO) of cellulose-hemicellulose network assembly & original description: none


Gene families : OG0003231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03490

Target Alias Description ECC score Gene Family Method Actions
Aev_g37635 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Gb_04570 No alias Glycosyltransferase-like At3g57200 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g09036 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ppi_g13510 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Solyc01g068200.4.1 ABI8, ELD1,... Glycosyltransferase-like KOBITO 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g14763 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e016383_P003 ABI8, ELD1,... Glycosyltransferase-like KOBITO 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!